recipe bioconductor-pandar

PANDA Algorithm

Homepage

https://bioconductor.org/packages/3.11/bioc/html/pandaR.html

License

GPL-2

Recipe

/bioconductor-pandar/meta.yaml

Links

biotools: pandar

Runs PANDA, an algorithm for discovering novel network structure by combining information from multiple complementary data sources.

package bioconductor-pandar

Versions

1.20.0-0, 1.18.0-0, 1.16.0-1, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• r-base >=4.0,<4.1.0a0

• r-ggplot2

• r-hexbin

• r-igraph

• r-matrixstats

• r-plyr

• r-reshape

• r-runit

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pandar

and update with:

conda update bioconductor-pandar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pandar:<tag>

(see bioconductor-pandar/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pandar/README.html)