recipe bioconductor-pasillatranscriptexpr

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

Homepage

https://bioconductor.org/packages/3.12/data/experiment/html/PasillaTranscriptExpr.html

License

GPL (>= 3)

Recipe

/bioconductor-pasillatranscriptexpr/meta.yaml

Provides kallisto workflow and transcript expression of RNA-Seq data from Brooks et al.

package bioconductor-pasillatranscriptexpr

Versions

1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0

Depends

• curl >=7.71.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pasillatranscriptexpr

and update with:

conda update bioconductor-pasillatranscriptexpr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pasillatranscriptexpr:<tag>

(see bioconductor-pasillatranscriptexpr/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pasillatranscriptexpr/README.html)