recipe bioconductor-pasillatranscriptexpr

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/PasillaTranscriptExpr.html

License:

GPL (>= 3)

Recipe:

/bioconductor-pasillatranscriptexpr/meta.yaml

Provides kallisto workflow and transcript expression of RNA-Seq data from Brooks et al.

package bioconductor-pasillatranscriptexpr

Versions:

1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0, 

1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0

Depends:

• bioconductor-data-packages >=20221103

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-pasillatranscriptexpr

and update with:

conda update bioconductor-pasillatranscriptexpr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pasillatranscriptexpr:<tag>

(see bioconductor-pasillatranscriptexpr/tags for valid values for <tag>)

Download stats

Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pasillatranscriptexpr/README.html)