Package Recipe 'bioconductor-pasillatranscriptexpr'

recipe bioconductor-pasillatranscriptexpr

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/PasillaTranscriptExpr.html
License:: GPL (>= 3)
Recipe:: /bioconductor-pasillatranscriptexpr/meta.yaml

Provides kallisto workflow and transcript expression of RNA-Seq data from Brooks et al.

package bioconductor-pasillatranscriptexpr¶

Versions:

1.25.0-0, 1.22.0-1, 1.22.0-0, 1.20.0-0, 1.18.0-1, 1.18.0-0, 1.17.0-0, 1.16.0-0, 1.14.0-0,

1.25.0-0, 1.22.0-1, 1.22.0-0, 1.20.0-0, 1.18.0-1, 1.18.0-0, 1.17.0-0, 1.16.0-0, 1.14.0-0, 1.12.0-1, 1.12.0-0, 1.10.0-0

Depends:

bioconductor-data-packages >=20221103
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-pasillatranscriptexpr

and update with:

conda update bioconductor-pasillatranscriptexpr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pasillatranscriptexpr:<tag>

(see bioconductor-pasillatranscriptexpr/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pasillatranscriptexpr/README.html)