recipe bioconductor-pathrender

Render molecular pathways

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/pathRender.html

License:

LGPL

Recipe:

/bioconductor-pathrender/meta.yaml

Links:

biotools: pathrender, doi: 10.1038/nmeth.3252

build graphs from pathway databases, render them by Rgraphviz.

package bioconductor-pathrender

Versions:

1.66.0-0,  1.62.0-0,  1.60.0-0,  1.58.0-1,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.52.0-1,  1.50.0-0, 

1.66.0-0,  1.62.0-0,  1.60.0-0,  1.58.0-1,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.52.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-cmap >=1.15.0,<1.16.0

• bioconductor-graph >=1.76.0,<1.77.0

• bioconductor-rgraphviz >=2.42.0,<2.43.0

• r-base >=4.2,<4.3.0a0

• r-rcolorbrewer

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-pathrender

and update with:

conda update bioconductor-pathrender

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pathrender:<tag>

(see bioconductor-pathrender/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pathrender/README.html)