recipe bioconductor-pathrender

build graphs from pathway databases, render them by Rgraphviz.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/pathRender.html

License

LGPL

Recipe

/bioconductor-pathrender/meta.yaml

Links

biotools: pathrender, doi: 10.1038/nmeth.3252

package bioconductor-pathrender

(downloads) docker_bioconductor-pathrender

Versions

1.50.0-0, 1.48.0-0, 1.46.0-0

Depends bioconductor-annotationdbi

>=1.44.0,<1.45.0

Depends bioconductor-cmap

>=1.15.0,<1.16.0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-rgraphviz

>=2.26.0,<2.27.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-rcolorbrewer

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pathrender

and update with:

conda update bioconductor-pathrender

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pathrender:<tag>

(see bioconductor-pathrender/tags for valid values for <tag>)