recipe bioconductor-pcaexplorer

Interactive Visualization of RNA-seq Data Using a Principal Components Approach

Homepage

https://bioconductor.org/packages/3.10/bioc/html/pcaExplorer.html

License

MIT + file LICENSE

Recipe

/bioconductor-pcaexplorer/meta.yaml

Links

biotools: pcaexplorer, doi: 10.18547/gcb.2017.vol3.iss1.e39

This package provides functionality for interactive visualization of RNA-seq datasets based on Principal Components Analysis. The methods provided allow for quick information extraction and effective data exploration. A Shiny application encapsulates the whole analysis.

package bioconductor-pcaexplorer

(downloads) docker_bioconductor-pcaexplorer

Versions

2.12.0-0, 2.10.0-1, 2.8.0-0, 2.6.0-0, 2.4.0-0, 2.2.1-0, 2.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pcaexplorer

and update with:

conda update bioconductor-pcaexplorer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pcaexplorer:<tag>

(see bioconductor-pcaexplorer/tags for valid values for <tag>)