recipe bioconductor-philr

PhILR is short for Phylogenetic Isometric Log-Ratio Transform. This package provides functions for the analysis of compositional data (e.g., data representing proportions of different variables/parts). Specifically this package allows analysis of compositional data where the parts can be related through a phylogenetic tree (as is common in microbiota survey data) and makes available the Isometric Log Ratio transform built from the phylogenetic tree and utilizing a weighted reference measure.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/philr.html

License

GPL-3

Recipe

/bioconductor-philr/meta.yaml

Links

biotools: philr

package bioconductor-philr

(downloads) docker_bioconductor-philr

Versions

1.10.0-0, 1.8.1-0, 1.6.0-0, 1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-philr

and update with:

conda update bioconductor-philr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-philr:<tag>

(see bioconductor-philr/tags for valid values for <tag>)