recipe bioconductor-plyranges

A fluent interface for manipulating GenomicRanges

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/plyranges.html

License:

Artistic-2.0

Recipe:

/bioconductor-plyranges/meta.yaml

A dplyr-like interface for interacting with the common Bioconductor classes Ranges and GenomicRanges. By providing a grammatical and consistent way of manipulating these classes their accessiblity for new Bioconductor users is hopefully increased.

package bioconductor-plyranges

Versions:

1.18.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.3-0,  1.2.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicalignments >=1.34.0,<1.35.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-rsamtools >=2.14.0,<2.15.0

• bioconductor-rtracklayer >=1.58.0,<1.59.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-dplyr

• r-magrittr

• r-rlang >=0.2.0

• r-tidyselect >=1.0.0

Required By:

• bioconductor-methylcc

• bioconductor-cfdnapro

• bioconductor-nullranges

• bioconductor-bobafit

• bioconductor-katdetectr

• bioconductor-nearbynding

• bioconductor-plotgardener

• bioconductor-dasper

• bioconductor-multicrispr

• bioconductor-inpas

• bioconductor-busparse

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-plyranges

and update with:

conda update bioconductor-plyranges

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-plyranges:<tag>

(see bioconductor-plyranges/tags for valid values for <tag>)

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