recipe bioconductor-preprocesscore

A collection of pre-processing functions

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/preprocessCore.html

License:

LGPL (>= 2)

Recipe:

/bioconductor-preprocesscore/meta.yaml

Links:

biotools: preprocesscore, doi: 10.1038/nmeth.3252

A library of core preprocessing routines.

package bioconductor-preprocesscore

Versions:

1.60.2-0,  1.60.0-0,  1.56.0-3,  1.56.0-2,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.1-0,  1.52.0-0, 

1.60.2-0,  1.60.0-0,  1.56.0-3,  1.56.0-2,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.1-0,  1.52.0-0,  1.50.0-0,  1.48.0-0,  1.46.0-1,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-0,  1.38.1-0,  1.34.0-0,  1.32.0-0

Depends:

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-methylclock

• bioconductor-madseq

• bioconductor-pigengene

• bioconductor-emdomics

• bioconductor-msprep

• r-ramclustr

• bioconductor-icheck

• bioconductor-oligo

• r-immunedeconv

• bioconductor-champ

• bioconductor-agimicrorna

• bioconductor-quantiseqr

• bioconductor-frmatools

• bioconductor-eximir

• bioconductor-cqn

• bioconductor-scate

• bioconductor-mimager

• bioconductor-peca

• bioconductor-tidybulk

• bioconductor-msstats

• bioconductor-affyplm

• bioconductor-refplus

• bioconductor-hipathia

• bioconductor-bnbc

• r-wgcna

• bioconductor-immunespacer

• r-metaboanalyst

• bioconductor-medips

• bioconductor-phosr

• bioconductor-probatch

• bioconductor-minfi

• bioconductor-panomir

• bioconductor-gse13015

• bioconductor-lumi

• r-noisyr

• bioconductor-mbcb

• r-hemdag

• bioconductor-affy

• bioconductor-normalyzerde

• bioconductor-fastliquidassociation

• bioconductor-bloodgen3module

• bioconductor-sesame

• r-bseqsc

• bioconductor-cn.farms

• bioconductor-yarn

• bioconductor-frma

• bioconductor-inpas

• bioconductor-qplexanalyzer

• bioconductor-soggi

• bioconductor-crlmm

• bioconductor-enmix

• bioconductor-mbqn

• r-bulkanalyser

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-preprocesscore

and update with:

conda update bioconductor-preprocesscore

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-preprocesscore:<tag>

(see bioconductor-preprocesscore/tags for valid values for <tag>)

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