recipe bioconductor-projectr

Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/projectR.html

License:

GPL (==2)

Recipe:

/bioconductor-projectr/meta.yaml

Functions for the projection of data into the spaces defined by PCA, CoGAPS, NMF, correlation, and clustering.

package bioconductor-projectr

Versions:

1.14.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends:

• bioconductor-cogaps >=3.18.0,<3.19.0

• bioconductor-limma >=3.54.0,<3.55.0

• r-base >=4.2,<4.3.0a0

• r-cluster

• r-dplyr

• r-ggalluvial

• r-ggplot2

• r-nmf

• r-rcolorbrewer

• r-reshape2

• r-rocr

• r-scales

• r-viridis

Required By:

• bioconductor-ataccogaps

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-projectr

and update with:

conda update bioconductor-projectr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-projectr:<tag>

(see bioconductor-projectr/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-projectr/README.html)