recipe bioconductor-pviz

Pviz adapts the Gviz package for protein sequences and data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/Pviz.html

License

Artistic-2.0

Recipe

/bioconductor-pviz/meta.yaml

Links

biotools: pviz, doi: 10.1007/978-1-4939-3037-1_10

package bioconductor-pviz

(downloads) docker_bioconductor-pviz

Versions

1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends bioconductor-biostrings

>=2.50.0,<2.51.0

Depends bioconductor-biovizbase

>=1.30.0,<1.31.0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends bioconductor-gviz

>=1.26.0,<1.27.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-data.table

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pviz

and update with:

conda update bioconductor-pviz

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pviz:<tag>

(see bioconductor-pviz/tags for valid values for <tag>)