recipe bioconductor-qfeatures

Quantitative features for mass spectrometry data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/QFeatures.html

License

Artistic-2.0

Recipe

/bioconductor-qfeatures/meta.yaml

The QFeatures infrastructure enables the management and processing of quantitative features for high-throughput mass spectrometry assays. It provides a familiar Bioconductor user experience to manages quantitative data across different assay levels (such as peptide spectrum matches, peptides and proteins) in a coherent and tractable format.

package bioconductor-qfeatures

Versions

1.4.0-0,  1.2.0-0,  1.0.0-2,  1.0.0-1

Depends

• bioconductor-annotationfilter >=1.18.0,<1.19.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-mscoreutils >=1.6.0,<1.7.0

• bioconductor-multiassayexperiment >=1.20.0,<1.21.0

• bioconductor-protgenerics >=1.26.0,<1.27.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-base >=4.1,<4.2.0a0

• r-igraph

• r-lazyeval

• r-plotly

Required By

• bioconductor-scp

• bioconductor-msqrob2

• bioconductor-scpdata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-qfeatures

and update with:

conda update bioconductor-qfeatures

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qfeatures:<tag>

(see bioconductor-qfeatures/tags for valid values for <tag>)

Download stats

Link to this page

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