- recipe bioconductor-qpgraph
Estimation of genetic and molecular regulatory networks from high-throughput genomics data
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/qpgraph.html
- License:
GPL (>= 2)
- Recipe:
- Links:
biotools: qpgraph
Estimate gene and eQTL networks from high-throughput expression and genotyping assays.
- package bioconductor-qpgraph¶
-
- Versions:
2.32.0-0
,2.28.2-0
,2.28.1-0
,2.28.0-0
,2.26.0-0
,2.24.3-0
,2.24.0-0
,2.22.0-0
,2.20.0-0
,2.32.0-0
,2.28.2-0
,2.28.1-0
,2.28.0-0
,2.26.0-0
,2.24.3-0
,2.24.0-0
,2.22.0-0
,2.20.0-0
,2.18.0-1
,2.16.0-0
,2.14.0-0
,2.12.0-0
- Depends:
bioconductor-annotate
>=1.76.0,<1.77.0
bioconductor-annotationdbi
>=1.60.0,<1.61.0
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocparallel
>=1.32.0,<1.33.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicfeatures
>=1.50.0,<1.51.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-graph
>=1.76.0,<1.77.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rgraphviz
>=2.42.0,<2.43.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
r-base
>=4.2,<4.3.0a0
r-matrix
>=1.5-0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-qpgraph
and update with:
conda update bioconductor-qpgraph
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-qpgraph:<tag>
(see bioconductor-qpgraph/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-qpgraph/README.html)