recipe bioconductor-quantsmooth

Quantile smoothing and genomic visualization of array data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/quantsmooth.html

License:

GPL-2

Recipe:

/bioconductor-quantsmooth/meta.yaml

Links:

biotools: quantsmooth, doi: 10.1038/nmeth.3252

Implements quantile smoothing as introduced in: Quantile smoothing of array CGH data; Eilers PH, de Menezes RX; Bioinformatics. 2005 Apr 1;21(7):1146-53.

package bioconductor-quantsmooth

Versions:

1.64.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.50.0-1,  1.50.0-0, 

1.64.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-0,  1.44.0-0,  1.42.0-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-quantreg

Required By:

• updio

• bioconductor-beadarraysnp

• bioconductor-sim

• bioconductor-gwastools

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-quantsmooth

and update with:

conda update bioconductor-quantsmooth

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-quantsmooth:<tag>

(see bioconductor-quantsmooth/tags for valid values for <tag>)

Download stats

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