recipe bioconductor-qubicdata

Data employed in the vignette of the QUBIC package

Homepage:

https://bioconductor.org/packages/3.18/data/experiment/html/QUBICdata.html

License:

Unlimited | file LICENSE

Recipe:

/bioconductor-qubicdata/meta.yaml

The data employed in the vignette of the QUBIC package. These data belong to Many Microbe Microarrays Database and STRING v10.

package bioconductor-qubicdata

(downloads) docker_bioconductor-qubicdata

versions:
1.30.0-0,  1.28.0-0,  1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0, 

1.30.0-0,  1.28.0-0,  1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-qubicdata

and update with::

   mamba update bioconductor-qubicdata

To create a new environment, run:

mamba create --name myenvname bioconductor-qubicdata

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-qubicdata:<tag>

(see `bioconductor-qubicdata/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qubicdata/README.html)