bioconductor-rain

downloads

This package uses non-parametric methods to detect rhythms in time series. It deals with outliers, missing values and is optimized for time series comprising 10-100 measurements. As it does not assume expect any distinct waveform it is optimal or detecting oscillating behavior (e.g. circadian or cell cycle) in e.g. genome- or proteome-wide biological measurements such as: micro arrays, proteome mass spectrometry, or metabolome measurements.

Home http://bioconductor.org/packages/3.6/bioc/html/rain.html
Versions 1.10.0, 1.12.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rain

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rain

and update with:

conda update bioconductor-rain

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rain.