recipe bioconductor-rbgl

An interface to the BOOST graph library

Homepage

https://bioconductor.org/packages/3.12/bioc/html/RBGL.html

License

Artistic-2.0

Recipe

/bioconductor-rbgl/meta.yaml

Links

biotools: rbgl, doi: 10.1093/bioinformatics/bth458

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

package bioconductor-rbgl

Versions

1.66.0-0,  1.64.0-0,  1.62.1-0,  1.60.0-1,  1.58.2-0,  1.58.1-0,  1.56.0-0,  1.54.0-0,  1.52.0-0, 

1.66.0-0,  1.64.0-0,  1.62.1-0,  1.60.0-1,  1.58.2-0,  1.58.1-0,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.48.1-1,  1.46.0-1,  1.46.0-0

Depends

• bioconductor-graph >=1.68.0,<1.69.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.5.0

• liblapack >=3.8.0,<4.0a0

• libstdcxx-ng >=7.5.0

• r-base >=4.0,<4.1.0a0

• r-bh

Required By

• bioconductor-alpine

• r-hemdag

• bioconductor-opencyto

• bioconductor-cytoml

• bioconductor-variantfiltering

• r-perfmeas

• bioconductor-category

• bioconductor-eventpointer

• bioconductor-gosim

• bioconductor-rdavidwebservice

• bioconductor-topaseq

• bioconductor-camera

• bioconductor-predictionet

• bioconductor-organismdbi

• bioconductor-migsa

• bioconductor-geneanswers

• r-pcalg

• uropa

• bioconductor-clipper

• bioconductor-biocviews

• bioconductor-apcomplex

• bioconductor-biocpkgtools

• bioconductor-flowworkspace

• bioconductor-gapgom

• bioconductor-pkgdeptools

• bioconductor-streamer

• r-grbase

• bioconductor-cellnoptr

• bioconductor-bionet

• bioconductor-rpsixml

• bioconductor-gostats

• bioconductor-chronos

• bioconductor-chippeakanno

• bioconductor-degraph

• bioconductor-ncigraph

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rbgl

and update with:

conda update bioconductor-rbgl

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rbgl:<tag>

(see bioconductor-rbgl/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rbgl/README.html)