recipe bioconductor-rbiopaxparser

Parses BioPax files and represents them in R

Homepage

https://bioconductor.org/packages/3.11/bioc/html/rBiopaxParser.html

License

GPL (>= 2)

Recipe

/bioconductor-rbiopaxparser/meta.yaml

Links

biotools: rbiopaxparser

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

package bioconductor-rbiopaxparser

Versions

2.28.0-0,  2.26.0-0,  2.24.0-1,  2.24.0-0,  2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.0-0,  2.16.0-0

Depends

• r-base >=4.0,<4.1.0a0

• r-data.table

• r-xml

Required By

• bioconductor-annotationhubdata

• bioconductor-pwomics

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rbiopaxparser

and update with:

conda update bioconductor-rbiopaxparser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rbiopaxparser:<tag>

(see bioconductor-rbiopaxparser/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rbiopaxparser/README.html)