recipe bioconductor-rbiopaxparser

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/rBiopaxParser.html

License

GPL (>= 2)

Recipe

/bioconductor-rbiopaxparser/meta.yaml

Links

biotools: rbiopaxparser

package bioconductor-rbiopaxparser

(downloads) docker_bioconductor-rbiopaxparser

Versions

2.24.0-0, 2.22.0-1, 2.22.0-0, 2.20.0-0, 2.18.0-0, 2.16.0-0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-data.table

Depends r-xml

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rbiopaxparser

and update with:

conda update bioconductor-rbiopaxparser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rbiopaxparser:<tag>

(see bioconductor-rbiopaxparser/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rbiopaxparser/README.html)