recipe bioconductor-reder

Interactive visualization and manipulation of nested networks

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RedeR.html

License

GPL (>= 2)

Recipe

/bioconductor-reder/meta.yaml

Links

biotools: reder

RedeR is an R-based package combined with a stand-alone Java application for interactive visualization and manipulation of modular structures, nested networks and multiple levels of hierarchical associations.

package bioconductor-reder

Versions

1.36.0-0, 1.34.0-0, 1.32.0-1, 1.32.0-0, 1.30.0-0, 1.28.0-0, 1.26.0-0

Depends

• openjdk

• r-base >=4.0,<4.1.0a0

• r-igraph

Required By

• bioconductor-panr

• bioconductor-transcriptogramer

• bioconductor-rtn

• bioconductor-fletcher2013b

• bioconductor-mulder2012

• bioconductor-treeandleaf

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-reder

and update with:

conda update bioconductor-reder

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-reder:<tag>

(see bioconductor-reder/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-reder/README.html)