recipe bioconductor-refplus

A function set for the Extrapolation Strategy (RMA+) and Extrapolation Averaging (RMA++) methods.

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RefPlus.html

License

GPL (>= 2)

Recipe

/bioconductor-refplus/meta.yaml

Links

biotools: refplus, doi: 10.1093/bioinformatics/btm357

The package contains functions for pre-processing Affymetrix data using the RMA+ and the RMA++ methods.

package bioconductor-refplus

Versions

1.58.0-0,  1.56.0-0,  1.54.0-1,  1.52.0-0,  1.50.0-0,  1.48.0-0

Depends

• bioconductor-affy >=1.66.0,<1.67.0

• bioconductor-affyplm >=1.64.0,<1.65.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-preprocesscore >=1.50.0,<1.51.0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-refplus

and update with:

conda update bioconductor-refplus

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-refplus:<tag>

(see bioconductor-refplus/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-refplus/README.html)