recipe bioconductor-refplus

A function set for the Extrapolation Strategy (RMA+) and Extrapolation Averaging (RMA++) methods.

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/RefPlus.html

License:

GPL (>= 2)

Recipe:

/bioconductor-refplus/meta.yaml

Links:

biotools: refplus, doi: 10.1093/bioinformatics/btm357

The package contains functions for pre-processing Affymetrix data using the RMA+ and the RMA++ methods.

package bioconductor-refplus

Versions:

1.68.0-0,  1.64.0-0,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-1,  1.52.0-0, 

1.68.0-0,  1.64.0-0,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-1,  1.52.0-0,  1.50.0-0,  1.48.0-0

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-affyplm >=1.74.0,<1.75.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-preprocesscore >=1.60.0,<1.61.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-refplus

and update with:

conda update bioconductor-refplus

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-refplus:<tag>

(see bioconductor-refplus/tags for valid values for <tag>)

Download stats

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