recipe bioconductor-regenrich

Gene regulator enrichment analysis

Homepage

https://bioconductor.org/packages/3.12/bioc/html/RegEnrich.html

License

GPL (>= 2)

Recipe

/bioconductor-regenrich/meta.yaml

This package is a pipeline to identify the key gene regulators in a biological process, for example in cell differentiation and in cell development after stimulation. There are four major steps in this pipeline: (1) differential expression analysis; (2) regulator-target network inference; (3) enrichment analysis; and (4) regulators scoring and ranking.

package bioconductor-regenrich

(downloads) docker_bioconductor-regenrich

Versions

1.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-regenrich

and update with:

conda update bioconductor-regenrich

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-regenrich:<tag>

(see bioconductor-regenrich/tags for valid values for <tag>)