recipe bioconductor-remp

Repetitive Element Methylation Prediction

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/REMP.html

License:

GPL-3

Recipe:

/bioconductor-remp/meta.yaml

Machine learning-based tools to predict DNA methylation of locus-specific repetitive elements (RE) by learning surrounding genetic and epigenetic information. These tools provide genomewide and single-base resolution of DNA methylation prediction on RE that are difficult to measure using array-based or sequencing-based platforms, which enables epigenome-wide association study (EWAS) and differentially methylated region (DMR) analysis on RE.

package bioconductor-remp

(downloads) docker_bioconductor-remp

Versions:

1.22.0-01.18.0-01.16.0-01.14.0-11.14.0-01.12.0-01.10.0-01.8.1-1

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-remp

and update with:

conda update bioconductor-remp

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-remp:<tag>

(see bioconductor-remp/tags for valid values for <tag>)

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