recipe bioconductor-repviz

Replicate oriented Visualization of a genomic region

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RepViz.html

License

GPL-3

Recipe

/bioconductor-repviz/meta.yaml

RepViz enables the view of a genomic region in a simple and efficient way. RepViz allows simultaneous viewing of both intra- and intergroup variation in sequencing counts of the studied conditions, as well as their comparison to the output features (e.g. identified peaks) from user selected data analysis methods.The RepViz tool is primarily designed for chromatin data such as ChIP-seq and ATAC-seq, but can also be used with other sequencing data such as RNA-seq, or combinations of different types of genomic data.

package bioconductor-repviz

(downloads) docker_bioconductor-repviz

Versions

1.4.0-01.2.0-01.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-repviz

and update with:

conda update bioconductor-repviz

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-repviz:<tag>

(see bioconductor-repviz/tags for valid values for <tag>)