Package Recipe 'bioconductor-rforproteomics'

recipe bioconductor-rforproteomics

Companion package to the 'Using R and Bioconductor for proteomics data analysis' publication

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/RforProteomics.html
License:: Artistic-2.0
Recipe:: /bioconductor-rforproteomics/meta.yaml

This package contains code to illustrate the 'Using R and Bioconductor for proteomics data analysis' and 'Visualisation of proteomics data using R and Bioconductor' manuscripts. The vignettes describe the code and data needed to reproduce the examples and figures described in the paper and functionality for proteomics visualisation. It also contain various function to discover R software for mass spectrometry and proteomics.

package bioconductor-rforproteomics¶

Versions:

1.35.1-0, 1.32.0-1, 1.31.1-0, 1.30.0-0, 1.28.1-0, 1.27.1-0, 1.26.0-0, 1.23.1-0, 1.22.0-1,

1.35.1-0, 1.32.0-1, 1.31.1-0, 1.30.0-0, 1.28.1-0, 1.27.1-0, 1.26.0-0, 1.23.1-0, 1.22.0-1, 1.20.0-0

Depends:

bioconductor-biocviews >=1.66.0,<1.67.0
bioconductor-data-packages >=20221103
bioconductor-msnbase >=2.24.0,<2.25.0
curl
r-base >=4.2,<4.3.0a0
r-biocmanager
r-r.utils

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rforproteomics

and update with:

conda update bioconductor-rforproteomics

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rforproteomics:<tag>

(see bioconductor-rforproteomics/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rforproteomics/README.html)