recipe bioconductor-rgraphviz

Provides plotting capabilities for R graph objects

Homepage

https://bioconductor.org/packages/3.12/bioc/html/Rgraphviz.html

License

EPL

Recipe

/bioconductor-rgraphviz/meta.yaml

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

package bioconductor-rgraphviz

Versions

2.34.0-0,  2.32.0-0,  2.30.0-0,  2.28.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-0,  2.20.0-1,  2.20.0-0, 

2.34.0-0,  2.32.0-0,  2.30.0-0,  2.28.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-0,  2.20.0-1,  2.20.0-0,  2.16.0-1,  2.16.0-0,  2.14.0-0,  2.13.0-1,  2.13.0-0

Depends

• bioconductor-graph >=1.68.0,<1.69.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.5.0

• liblapack >=3.8.0,<4.0a0

• libstdcxx-ng >=7.5.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-biocgraph

• bioconductor-cellnoptr

• bioconductor-qpgraph

• bioconductor-degraph

• bioconductor-splicinggraphs

• bioconductor-oncosimulr

• bioconductor-gostats

• r-ontologyplot

• bioconductor-tronco

• bioconductor-flowcl

• bioconductor-pathview

• bioconductor-mirintegrator

• bioconductor-migsa

• bioconductor-compgo

• bioconductor-trackviewer

• bioconductor-bioconcotk

• bioconductor-hyperdraw

• bioconductor-apcomplex

• bioconductor-pathrender

• bioconductor-enrichmentbrowser

• bioconductor-chimeraviz

• bioconductor-mineica

• bioconductor-flowworkspace

• bioconductor-pigengene

• bioconductor-genenetworkbuilder

• r-dnet

• bioconductor-paircompviz

• bioconductor-netresponse

• bioconductor-flowmerge

• r-metaboanalyst

• bioconductor-mnem

• bioconductor-rontotools

• bioconductor-ontoproc

• bioconductor-tdaracne

• bioconductor-biomvcclass

• bioconductor-cytoml

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rgraphviz

and update with:

conda update bioconductor-rgraphviz

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rgraphviz:<tag>

(see bioconductor-rgraphviz/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rgraphviz/README.html)