recipe bioconductor-ritandata

This package contains reference annotation and network data sets

Homepage:

https://bioconductor.org/packages/3.18/data/experiment/html/RITANdata.html

License:

file LICENSE

Recipe:

/bioconductor-ritandata/meta.yaml

Data such as is contained in the two R data files in this package are required for the RITAN package examples. Users are highly encouraged to use their own or additional resources in conjunction with RITANdata. See the RITAN vignettes and RITAN.md for more information, such as gathering more up-to-date annotation data.

package bioconductor-ritandata

(downloads) docker_bioconductor-ritandata

versions:
1.26.0-0,  1.24.0-0,  1.22.0-0,  1.21.0-0,  1.20.0-0,  1.18.1-0,  1.18.0-0,  1.16.0-0,  1.14.0-1, 

1.26.0-0,  1.24.0-0,  1.22.0-0,  1.21.0-0,  1.20.0-0,  1.18.1-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.13.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-ritandata

and update with::

   mamba update bioconductor-ritandata

To create a new environment, run:

mamba create --name myenvname bioconductor-ritandata

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-ritandata:<tag>

(see `bioconductor-ritandata/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ritandata/README.html)