recipe bioconductor-rnainteractmapk

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/RNAinteractMAPK.html

License

Artistic-2.0

Recipe

/bioconductor-rnainteractmapk/meta.yaml

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

package bioconductor-rnainteractmapk

Versions

1.32.0-0,  1.30.0-0,  1.25.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-genefilter >=1.76.0,<1.77.0

• bioconductor-rnainteract >=1.42.0,<1.43.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

• r-fields

• r-gdata

• r-lattice

• r-mass

• r-sparselda

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rnainteractmapk

and update with:

conda update bioconductor-rnainteractmapk

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rnainteractmapk:<tag>

(see bioconductor-rnainteractmapk/tags for valid values for <tag>)

Download stats

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