recipe bioconductor-roseq

A Rank Based Approach to Modeling Gene Expression

Homepage

https://bioconductor.org/packages/3.11/bioc/html/ROSeq.html

License

GPL-3

Recipe

/bioconductor-roseq/meta.yaml

A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.

package bioconductor-roseq

Versions

1.0.0-0

Depends

• bioconductor-edger >=3.30.0,<3.31.0

• bioconductor-limma >=3.44.0,<3.45.0

• r-base >=4.0,<4.1.0a0

• r-pbmcapply

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-roseq

and update with:

conda update bioconductor-roseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-roseq:<tag>

(see bioconductor-roseq/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-roseq/README.html)