recipe bioconductor-rqubic

Qualitative biclustering algorithm for expression data analysis in R

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/rqubic.html

License:

GPL-2

Recipe:

/bioconductor-rqubic/meta.yaml

This package implements the QUBIC algorithm introduced by Li et al. for the qualitative biclustering with gene expression data.

package bioconductor-rqubic

Versions:

1.44.0-0,  1.40.0-2,  1.40.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0, 

1.44.0-0,  1.40.0-2,  1.40.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-1,  1.28.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-biclust

Required By:

• bioconductor-mirsm

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rqubic

and update with:

conda update bioconductor-rqubic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rqubic:<tag>

(see bioconductor-rqubic/tags for valid values for <tag>)

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