recipe bioconductor-rtcga.cnv

CNV (Copy-number variation) datasets from The Cancer Genome Atlas Project

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/RTCGA.CNV.html

License:

GPL-2

Recipe:

/bioconductor-rtcga.cnv/meta.yaml

Package provides CNV (based on Merge snp) datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Data format is explained here https://wiki.nci.nih.gov/display/TCGA/Retrieving +Data+Using+the+Data+Matrix. Data from 2015-11-01 snapshot.

package bioconductor-rtcga.cnv

(downloads) docker_bioconductor-rtcga.cnv

Versions:
1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1, 

1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rtcga.cnv

and update with:

conda update bioconductor-rtcga.cnv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtcga.cnv:<tag>

(see bioconductor-rtcga.cnv/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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