bioconductor-rtcga.mrna

downloads

Package provides mRNA datasets from The Cancer Genome Atlas Project for all available cohorts types from http://gdac.broadinstitute.org/. Data format is explained here https://wiki.nci.nih.gov/display/TCGA/Gene+expression+data Data from 2015-11-01 snapshot.

Home http://bioconductor.org/packages/3.7/data/experiment/html/RTCGA.mRNA.html
Versions 1.8.0, 1.6.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rtcga.mrna

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rtcga.mrna

and update with:

conda update bioconductor-rtcga.mrna

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rtcga.mrna.