recipe bioconductor-rtopper

the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/RTopper.html

License

GPL (>= 3)

Recipe

/bioconductor-rtopper/meta.yaml

Links

biotools: rtopper

package bioconductor-rtopper

(downloads) docker_bioconductor-rtopper

Versions

1.28.0-0, 1.26.0-0, 1.24.0-0, 1.22.0-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-limma

>=3.38.0,<3.39.0

Depends bioconductor-multtest

>=2.38.0,<2.39.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rtopper

and update with:

conda update bioconductor-rtopper

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtopper:<tag>

(see bioconductor-rtopper/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rtopper/README.html)