-
recipe
bioconductor-rvs
Computes estimates of the probability of related individuals sharing a rare variant
- Homepage
- License
GPL-2
- Recipe
Rare Variant Sharing (RVS) implements tests of association and linkage between rare genetic variant genotypes and a dichotomous phenotype, e.g. a disease status, in family samples. The tests are based on probabilities of rare variant sharing by relatives under the null hypothesis of absence of linkage and association between the rare variants and the phenotype and apply to single variants or multiple variants in a region (e.g. gene-based test).
-
package
bioconductor-rvs
¶ -
- Versions
1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.4.0-0
- Depends
bioconductor-snpstats
>=1.40.0,<1.41.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rvs
and update with:
conda update bioconductor-rvs
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rvs:<tag>
(see bioconductor-rvs/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rvs/README.html)