recipe bioconductor-rwikipathways

rWikiPathways - R client library for the WikiPathways API

Homepage

https://bioconductor.org/packages/3.14/bioc/html/rWikiPathways.html

License

MIT + file LICENSE

Recipe

/bioconductor-rwikipathways/meta.yaml

Use this package to interface with the WikiPathways API. It provides programmatic access to WikiPathways content in multiple data and image formats, including official monthly release files and convenient GMT read/write functions.

package bioconductor-rwikipathways

Versions

1.14.0-0,  1.12.0-0,  1.10.1-0,  1.10.0-0,  1.8.2-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0

Depends

• r-base >=4.1,<4.2.0a0

• r-data.table

• r-httr

• r-rcurl

• r-rjson

• r-tidyr

• r-xml

Required By

• bioconductor-timirgen

• bioconductor-famat

• bioconductor-multisight

• bioconductor-norce

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rwikipathways

and update with:

conda update bioconductor-rwikipathways

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rwikipathways:<tag>

(see bioconductor-rwikipathways/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rwikipathways/README.html)