recipe bioconductor-sampleclassifierdata

Pre-processed data for use with the sampleClassifier package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/sampleClassifierData.html

License:

Artistic-2.0

Recipe:

/bioconductor-sampleclassifierdata/meta.yaml

This package contains two microarray and two RNA-seq datasets that have been preprocessed for use with the sampleClassifier package. The RNA-seq data are derived from Fagerberg et al. (2014) and the Illumina Body Map 2.0 data. The microarray data are derived from Roth et al. (2006) and Ge et al. (2005).

package bioconductor-sampleclassifierdata

Versions:

1.22.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.1-0,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1, 

1.22.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.1-0,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0

Depends:

• bioconductor-data-packages >=20221106

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-sampleclassifierdata

and update with:

conda update bioconductor-sampleclassifierdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sampleclassifierdata:<tag>

(see bioconductor-sampleclassifierdata/tags for valid values for <tag>)

Download stats

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