recipe bioconductor-sangerseqr

Tools for Sanger Sequencing Data in R

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/sangerseqR.html

License:

GPL-2

Recipe:

/bioconductor-sangerseqr/meta.yaml

Links:

biotools: sangerseqr

This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms.

package bioconductor-sangerseqr

Versions:

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0, 

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-0

Depends:

• bioconductor-biostrings >=2.66.0,<2.67.0

• r-base >=4.2,<4.3.0a0

• r-shiny

Required By:

• bioconductor-scifer

• bioconductor-sangeranalyser

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-sangerseqr

and update with:

conda update bioconductor-sangerseqr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sangerseqr:<tag>

(see bioconductor-sangerseqr/tags for valid values for <tag>)

Download stats

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