recipe bioconductor-scaledmatrix

Creating a DelayedMatrix of Scaled and Centered Values

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ScaledMatrix.html

License:

GPL-3

Recipe:

/bioconductor-scaledmatrix/meta.yaml

Provides delayed computation of a matrix of scaled and centered values. The result is equivalent to using the scale() function but avoids explicit realization of a dense matrix during block processing. This permits greater efficiency in common operations, most notably matrix multiplication.

package bioconductor-scaledmatrix

Versions:

1.6.0-0,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-delayedarray >=0.24.0,<0.25.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-matrix

Required By:

• bioconductor-scpca

• bioconductor-mumosa

• bioconductor-batchelor

• bioconductor-biocsingular

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-scaledmatrix

and update with:

conda update bioconductor-scaledmatrix

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scaledmatrix:<tag>

(see bioconductor-scaledmatrix/tags for valid values for <tag>)

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