- recipe bioconductor-scone
Single Cell Overview of Normalized Expression data
- Homepage
- License
Artistic-2.0
- Recipe
SCONE is an R package for comparing and ranking the performance of different normalization schemes for single-cell RNA-seq and other high-throughput analyses.
- package bioconductor-scone¶
-
- Versions
1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.1-0
,1.6.0-0
- Depends
bioconductor-aroma.light
>=3.24.0,<3.25.0
bioconductor-biocparallel
>=1.28.0,<1.29.0
bioconductor-edger
>=3.36.0,<3.37.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-matrixgenerics
>=1.6.0,<1.7.0
bioconductor-rhdf5
>=2.38.0,<2.39.0
bioconductor-ruvseq
>=1.28.0,<1.29.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-scone
and update with:
conda update bioconductor-scone
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-scone:<tag>
(see bioconductor-scone/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-scone/README.html)