- recipe bioconductor-scpdata
Single-Cell Proteomics Data Package
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/scpdata.html
- License:
GPL-2
- Recipe:
The package disseminates mass spectrometry (MS)-based single-cell proteomics (SCP) datasets. The data were collected from published work and formatted using the `scp` data structure. The data sets contain quantitative information at spectrum, peptide and/or protein level for single cells or minute sample amounts.
- package bioconductor-scpdata¶
-
- Versions:
1.6.0-0
,1.2.0-1
,1.2.0-0
,1.0.0-0
- Depends:
bioconductor-annotationhub
>=3.6.0,<3.7.0
bioconductor-data-packages
>=20221108
bioconductor-experimenthub
>=2.6.0,<2.7.0
bioconductor-qfeatures
>=1.8.0,<1.9.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-singlecellexperiment
>=1.20.0,<1.21.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-scpdata
and update with:
conda update bioconductor-scpdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-scpdata:<tag>
(see bioconductor-scpdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-scpdata/README.html)