recipe bioconductor-scrnaseq

Gene-level read counts of three public scRNA-seq datasets. See vignette for details.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/scRNAseq.html

License

CC0

Recipe

/bioconductor-scrnaseq/meta.yaml

package bioconductor-scrnaseq

(downloads) docker_bioconductor-scrnaseq

Versions

1.8.0-0, 1.6.0-0

Depends bioconductor-summarizedexperiment

>=1.12.0,<1.13.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends wget

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scrnaseq

and update with:

conda update bioconductor-scrnaseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scrnaseq:<tag>

(see bioconductor-scrnaseq/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-scrnaseq/README.html)