-
recipe
bioconductor-seqlogo
Sequence logos for DNA sequence alignments
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/seqLogo.html
- License
LGPL (>= 2)
- Recipe
- Links
biotools: seqlogo, doi: 10.1038/nmeth.3252
seqLogo takes the position weight matrix of a DNA sequence motif and plots the corresponding sequence logo as introduced by Schneider and Stephens (1990).
-
package
bioconductor-seqlogo
¶ -
- Versions
1.56.0-0
,1.54.1-0
,1.52.0-0
,1.50.0-1
,1.50.0-0
,1.48.0-0
,1.46.0-0
,1.44.0-0
,1.42.0-0
,1.56.0-0
,1.54.1-0
,1.52.0-0
,1.50.0-1
,1.50.0-0
,1.48.0-0
,1.46.0-0
,1.44.0-0
,1.42.0-0
,1.38.0-0
,1.36.0-0
- Depends
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-seqlogo
and update with:
conda update bioconductor-seqlogo
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-seqlogo:<tag>
(see bioconductor-seqlogo/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-seqlogo/README.html)