recipe bioconductor-signaturesearchdata

Datasets for signatureSearch package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/signatureSearchData.html

License:

Artistic-2.0

Recipe:

/bioconductor-signaturesearchdata/meta.yaml

CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.

package bioconductor-signaturesearchdata

Versions:

1.12.0-0,  1.8.4-0,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0,  0.99.14-1

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-data-packages >=20221108

• bioconductor-experimenthub >=2.6.0,<2.7.0

• bioconductor-limma >=3.54.0,<3.55.0

• bioconductor-rhdf5 >=2.42.0,<2.43.0

• curl

• r-base >=4.2,<4.3.0a0

• r-dplyr

• r-magrittr

• r-r.utils

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-signaturesearchdata

and update with:

conda update bioconductor-signaturesearchdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-signaturesearchdata:<tag>

(see bioconductor-signaturesearchdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-signaturesearchdata/README.html)