recipe bioconductor-signaturesearchdata

Datasets for signatureSearch package

Homepage

https://bioconductor.org/packages/3.10/data/experiment/html/signatureSearchData.html

License

Artistic-2.0

Recipe

/bioconductor-signaturesearchdata/meta.yaml

CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.

package bioconductor-signaturesearchdata

Versions

0.99.14-1

Depends

• bioconductor-affy >=1.64.0,<1.65.0

• bioconductor-biobase >=2.46.0,<2.47.0

• bioconductor-experimenthub >=1.12.0,<1.13.0

• bioconductor-limma >=3.42.0,<3.43.0

• bioconductor-rhdf5 >=2.30.0,<2.31.0

• bioconductor-signaturesearch >=1.0.0,<1.1.0

• curl >=7.65.3,<8.0a0

• r-base >=3.6,<3.7.0a0

• r-dplyr

• r-magrittr

• r-r.utils

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-signaturesearchdata

and update with:

conda update bioconductor-signaturesearchdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-signaturesearchdata:<tag>

(see bioconductor-signaturesearchdata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-signaturesearchdata/README.html)