recipe bioconductor-signaturesearchdata

Datasets for signatureSearch package

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/signatureSearchData.html

License

Artistic-2.0

Recipe

/bioconductor-signaturesearchdata/meta.yaml

CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.

package bioconductor-signaturesearchdata

Versions

1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0,  0.99.14-1

Depends

• bioconductor-affy >=1.72.0,<1.73.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-experimenthub >=2.2.0,<2.3.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-rhdf5 >=2.38.0,<2.39.0

• bioconductor-signaturesearch >=1.8.0,<1.9.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

• r-dplyr

• r-magrittr

• r-r.utils

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-signaturesearchdata

and update with:

conda update bioconductor-signaturesearchdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-signaturesearchdata:<tag>

(see bioconductor-signaturesearchdata/tags for valid values for <tag>)

Download stats

Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-signaturesearchdata/README.html)