recipe bioconductor-simat

GC-SIM-MS data processing and alaysis tool

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/SIMAT.html

License:

GPL-2

Recipe:

/bioconductor-simat/meta.yaml

Links:

biotools: simat, doi: 10.1186/s12859-015-0681-2

This package provides a pipeline for analysis of GC-MS data acquired in selected ion monitoring (SIM) mode. The tool also provides a guidance in choosing appropriate fragments for the targets of interest by using an optimization algorithm. This is done by considering overlapping peaks from a provided library by the user.

package bioconductor-simat

(downloads) docker_bioconductor-simat

Versions:
1.30.0-01.26.0-21.26.0-11.26.0-01.24.0-01.22.0-11.22.0-01.20.0-01.18.0-0

1.30.0-01.26.0-21.26.0-11.26.0-01.24.0-01.22.0-11.22.0-01.20.0-01.18.0-01.16.0-11.14.0-01.10.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-simat

and update with:

conda update bioconductor-simat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-simat:<tag>

(see bioconductor-simat/tags for valid values for <tag>)

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