recipe bioconductor-singlecellmultimodal

Integrating Multi-modal Single Cell Experiment datasets

Homepage

https://bioconductor.org/packages/3.13/data/experiment/html/SingleCellMultiModal.html

License

Artistic-2.0

Recipe

/bioconductor-singlecellmultimodal/meta.yaml

SingleCellMultiModal is an ExperimentHub package that serves multiple datasets obtained from GEO and other sources and represents them as MultiAssayExperiment objects. We provide several multi-modal datasets including scNMT, 10X Multiome, seqFISH, CITEseq, SCoPE2, and others. The scope of the package is is to provide data for benchmarking and analysis.

package bioconductor-singlecellmultimodal

(downloads) docker_bioconductor-singlecellmultimodal

Versions

1.4.1-01.2.4-01.1.19-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-singlecellmultimodal

and update with:

conda update bioconductor-singlecellmultimodal

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-singlecellmultimodal:<tag>

(see bioconductor-singlecellmultimodal/tags for valid values for <tag>)

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