- recipe bioconductor-singlecellsignalr
Cell Signalling Using Single Cell RNAseq Data Analysis
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/SingleCellSignalR.html
- License:
GPL-3
- Recipe:
Allows single cell RNA seq data analysis, clustering, creates internal network and infers cell-cell interactions.
- package bioconductor-singlecellsignalr¶
-
- Versions:
1.10.0-0
,1.6.0-0
,1.4.0-0
,1.2.0-1
,1.2.0-0
,1.0.0-0
- Depends:
bioconductor-edger
>=3.40.0,<3.41.0
bioconductor-limma
>=3.54.0,<3.55.0
bioconductor-multtest
>=2.54.0,<2.55.0
bioconductor-scran
>=1.26.0,<1.27.0
bioconductor-simlr
>=1.24.0,<1.25.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-singlecellsignalr
and update with:
conda update bioconductor-singlecellsignalr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-singlecellsignalr:<tag>
(see bioconductor-singlecellsignalr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-singlecellsignalr/README.html)