- recipe bioconductor-singlecellsignalr
Cell Signalling Using Single Cell RNAseq Data Analysis
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/SingleCellSignalR.html
- License
GPL-3
- Recipe
Allows single cell RNA seq data analysis, clustering, creates internal network and infers cell-cell interactions.
- package bioconductor-singlecellsignalr¶
-
- Versions
1.6.0-0
,1.4.0-0
,1.2.0-1
,1.2.0-0
,1.0.0-0
- Depends
bioconductor-edger
>=3.36.0,<3.37.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-multtest
>=2.50.0,<2.51.0
bioconductor-scran
>=1.22.0,<1.23.0
bioconductor-simlr
>=1.20.0,<1.21.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-singlecellsignalr
and update with:
conda update bioconductor-singlecellsignalr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-singlecellsignalr:<tag>
(see bioconductor-singlecellsignalr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-singlecellsignalr/README.html)