- recipe bioconductor-snapcgh
Segmentation, normalisation and processing of aCGH data
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/snapCGH.html
- License:
GPL
- Recipe:
Methods for segmenting, normalising and processing aCGH data; including plotting functions for visualising raw and segmented data for individual and multiple arrays.
- package bioconductor-snapcgh¶
-
- Versions:
1.64.0-1
,1.64.0-0
,1.62.0-0
,1.60.0-1
,1.60.0-0
,1.58.0-0
,1.56.0-0
,1.54.0-1
- Depends:
bioconductor-acgh
>=1.72.0,<1.73.0
bioconductor-dnacopy
>=1.68.0,<1.69.0
bioconductor-glad
>=2.58.0,<2.59.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-tilingarray
>=1.72.0,<1.73.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-snapcgh
and update with:
conda update bioconductor-snapcgh
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-snapcgh:<tag>
(see bioconductor-snapcgh/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-snapcgh/README.html)