recipe bioconductor-somaticsignatures

The SomaticSignatures package identifies mutational signatures of single nucleotide variants (SNVs). It provides a infrastructure related to the methodology described in Nik-Zainal (2012, Cell), with flexibility in the matrix decomposition algorithms.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/SomaticSignatures.html

License

MIT + file LICENSE

Recipe

/bioconductor-somaticsignatures/meta.yaml

Links

biotools: somaticsignatures

package bioconductor-somaticsignatures

(downloads) docker_bioconductor-somaticsignatures

Versions

2.20.0-1, 2.18.0-0, 2.16.0-0, 2.14.0-0, 2.12.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-somaticsignatures

and update with:

conda update bioconductor-somaticsignatures

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-somaticsignatures:<tag>

(see bioconductor-somaticsignatures/tags for valid values for <tag>)