recipe bioconductor-sparsematrixstats

Summary Statistics for Rows and Columns of Sparse Matrices

Homepage

https://bioconductor.org/packages/3.11/bioc/html/sparseMatrixStats.html

License

MIT + file LICENSE

Recipe

/bioconductor-sparsematrixstats/meta.yaml

High performance functions for row and column operations on sparse matrices. For example: col / rowMeans2, col / rowMedians, col / rowVars etc. Currently, the optimizations are limited to data in the column sparse format. This package is inspired by the matrixStats package by Henrik Bengtsson.

package bioconductor-sparsematrixstats

(downloads) docker_bioconductor-sparsematrixstats

Versions

1.0.0-11.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sparsematrixstats

and update with:

conda update bioconductor-sparsematrixstats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sparsematrixstats:<tag>

(see bioconductor-sparsematrixstats/tags for valid values for <tag>)