Package Recipe 'bioconductor-spatialdmelxsim'

recipe bioconductor-spatialdmelxsim

Spatial allelic expression counts for fly cross embryo

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/spatialDmelxsim.html
License:: GPL-3
Recipe:: /bioconductor-spatialdmelxsim/meta.yaml

Spatial allelic expression counts from Combs & Fraser (2018), compiled into a SummarizedExperiment object. This package contains data of allelic expression counts of spatial slices of a fly embryo, a Drosophila melanogaster x Drosophila simulans cross. See the CITATION file for the data source, and the associated script for how the object was constructed from publicly available data.

package bioconductor-spatialdmelxsim¶

Versions:

1.4.0-0, 1.0.0-1, 1.0.0-0

Depends:

bioconductor-data-packages >=20221108
bioconductor-experimenthub >=2.6.0,<2.7.0
bioconductor-summarizedexperiment >=1.28.0,<1.29.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-spatialdmelxsim

and update with:

conda update bioconductor-spatialdmelxsim

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-spatialdmelxsim:<tag>

(see bioconductor-spatialdmelxsim/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-spatialdmelxsim/README.html)