- recipe bioconductor-specond
Condition specific detection from expression data
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/SpeCond.html
- License
LGPL (>=2)
- Recipe
- Links
biotools: specond, doi: 10.1186/gb-2011-12-12-413
This package performs a gene expression data analysis to detect condition-specific genes. Such genes are significantly up- or down-regulated in a small number of conditions. It does so by fitting a mixture of normal distributions to the expression values. Conditions can be environmental conditions, different tissues, organs or any other sources that you wish to compare in terms of gene expression.
- package bioconductor-specond¶
-
- Versions
1.48.0-0
,1.46.0-0
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.36.0-0
,1.34.0-0
,1.48.0-0
,1.46.0-0
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
r-base
>=4.1,<4.2.0a0
r-hwriter
>=1.1
r-mclust
>=3.3.1
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-specond
and update with:
conda update bioconductor-specond
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-specond:<tag>
(see bioconductor-specond/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-specond/README.html)