bioconductor-splinetimer

downloads

This package provides functions for differential gene expression analysis of gene expression time-course data. Natural cubic spline regression models are used. Identified genes may further be used for pathway enrichment analysis and/or the reconstruction of time dependent gene regulatory association networks.

Home http://bioconductor.org/packages/3.7/bioc/html/splineTimeR.html
Versions 1.8.0, 1.6.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-splinetimer
Links biotools: splinetimer, doi: 10.1371/journal.pone.0160791

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-splinetimer

and update with:

conda update bioconductor-splinetimer

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-splinetimer.