recipe bioconductor-starank

Stability Ranking

Homepage:

https://bioconductor.org/packages/3.18/bioc/html/staRank.html

License:

GPL

Recipe:

/bioconductor-starank/meta.yaml

Detecting all relevant variables from a data set is challenging, especially when only few samples are available and data is noisy. Stability ranking provides improved variable rankings of increased robustness using resampling or subsampling.

package bioconductor-starank

(downloads) docker_bioconductor-starank

versions:
1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-0,  1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.24.1-0, 

1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-0,  1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.24.1-0,  1.24.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-0

depends bioconductor-cellhts2:

>=2.66.0,<2.67.0

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-starank

and update with::

   mamba update bioconductor-starank

To create a new environment, run:

mamba create --name myenvname bioconductor-starank

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-starank:<tag>

(see `bioconductor-starank/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-starank/README.html)